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Sample GSM139608 Query DataSets for GSM139608
Status Public on Dec 19, 2008
Title HB71
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : pCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T3
Node: N0
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.96937360280713
117_3p_at 8.00285897234602
1494_3p_f_at 7.46450527148366
1552275_3p_s_at 7.58453807114695
1552281_3p_at 9.09451025816274
1552296_3p_at 6.21339455098473
1552302_3p_at 6.15026017277605
1552311_3p_a_at 8.3664430257595
1552321_3p_a_at 4.48048874373079
1552340_3p_at 6.93754902079193
1552343_3p_s_at 8.74241357757693
1552354_3p_at 7.38389349239204
1552476_3p_s_at 7.14355768337171
1552480_3p_s_at 3.70068330998434
1552504_3p_a_at 7.4950047786558
1552518_3p_s_at 6.3341194569807
1552528_3p_at 8.31039575647533
1552535_3p_at 7.66613764281511
1552566_3p_at 6.45648111354439
1552575_3p_a_at 8.24795238330926

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139608.cel.gz 8.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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