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Sample GSM139603 Query DataSets for GSM139603
Status Public on Dec 19, 2008
Title HB66
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : Ep
Progesterone Receptor : Pp
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 9.433379130988
117_3p_at 7.56769931263942
1494_3p_f_at 7.55596652354419
1552275_3p_s_at 7.98092079707668
1552281_3p_at 9.21787305324995
1552296_3p_at 5.88031909122218
1552302_3p_at 6.13219084066155
1552311_3p_a_at 8.20001706007683
1552321_3p_a_at 5.8908907706495
1552340_3p_at 6.59323131973953
1552343_3p_s_at 6.66561063683452
1552354_3p_at 7.52107251631398
1552476_3p_s_at 7.81091449672708
1552480_3p_s_at 3.47064767634286
1552504_3p_a_at 7.75927389701253
1552518_3p_s_at 5.74691561829716
1552528_3p_at 7.99294606812022
1552535_3p_at 7.95192342003058
1552566_3p_at 6.57893738492939
1552575_3p_a_at 9.778141108297

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139603.cel.gz 8.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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