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Sample GSM139596 Query DataSets for GSM139596
Status Public on Dec 19, 2008
Title HB59
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : Ep
Progesterone Receptor : Pn
Size: T2
Node: N0
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.70632782461225
117_3p_at 7.47497919416163
1494_3p_f_at 8.19058286040763
1552275_3p_s_at 7.66382776975925
1552281_3p_at 9.21877724534088
1552296_3p_at 5.9402774892008
1552302_3p_at 5.8159252346796
1552311_3p_a_at 8.24700441728324
1552321_3p_a_at 4.69211172647846
1552340_3p_at 6.37097341912692
1552343_3p_s_at 6.77632607321497
1552354_3p_at 7.18534546454197
1552476_3p_s_at 7.64346937938035
1552480_3p_s_at 3.38095303072785
1552504_3p_a_at 7.766119314947
1552518_3p_s_at 5.5928002662719
1552528_3p_at 8.1850469964625
1552535_3p_at 7.90801143241293
1552566_3p_at 6.8046644628296
1552575_3p_a_at 9.24362724628447

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139596.cel.gz 8.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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