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Sample GSM139595 Query DataSets for GSM139595
Status Public on Dec 19, 2008
Title HB58
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : pCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N0
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.80107633091394
117_3p_at 8.0434863487316
1494_3p_f_at 7.5072793036683
1552275_3p_s_at 8.04318285519741
1552281_3p_at 9.00601355319685
1552296_3p_at 5.86672361533858
1552302_3p_at 6.06080338585748
1552311_3p_a_at 8.24209697962678
1552321_3p_a_at 4.77536539057746
1552340_3p_at 6.63173778973929
1552343_3p_s_at 7.7125506757415
1552354_3p_at 7.78477987233416
1552476_3p_s_at 7.70043015002133
1552480_3p_s_at 4.03070841543695
1552504_3p_a_at 7.81920457024226
1552518_3p_s_at 5.75126198656658
1552528_3p_at 8.12908933837321
1552535_3p_at 7.84156775538818
1552566_3p_at 6.28303759318998
1552575_3p_a_at 7.7873457918161

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139595.cel.gz 8.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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