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Sample GSM139593 Query DataSets for GSM139593
Status Public on Dec 19, 2008
Title HB56
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : pCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T3
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.82152494333389
117_3p_at 7.994205967479
1494_3p_f_at 7.48622912367133
1552275_3p_s_at 7.69675078623378
1552281_3p_at 9.20114291049376
1552296_3p_at 5.60966753325086
1552302_3p_at 6.06342004994806
1552311_3p_a_at 8.4469150742854
1552321_3p_a_at 4.34744223453995
1552340_3p_at 6.62060101861181
1552343_3p_s_at 9.10758452347152
1552354_3p_at 7.16204889440526
1552476_3p_s_at 7.5904908140187
1552480_3p_s_at 3.34884067182072
1552504_3p_a_at 7.65781914758209
1552518_3p_s_at 6.03539016928791
1552528_3p_at 8.53459967672982
1552535_3p_at 8.1455658836011
1552566_3p_at 6.8505391149807
1552575_3p_a_at 7.48605717825785

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139593.cel.gz 8.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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