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Sample GSM139589 Query DataSets for GSM139589
Status Public on Dec 19, 2008
Title HB52
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : pCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T3
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 9.13670518946867
117_3p_at 7.69734833974419
1494_3p_f_at 7.50235230422392
1552275_3p_s_at 7.42979316275002
1552281_3p_at 9.03253454574616
1552296_3p_at 5.7281584020788
1552302_3p_at 6.02485508095857
1552311_3p_a_at 8.26026022019472
1552321_3p_a_at 4.57294138986249
1552340_3p_at 6.64382813596596
1552343_3p_s_at 7.41092369245743
1552354_3p_at 7.21271391692293
1552476_3p_s_at 7.59680218694633
1552480_3p_s_at 3.64818971252675
1552504_3p_a_at 7.666392815005
1552518_3p_s_at 5.39837383208169
1552528_3p_at 8.18043543297907
1552535_3p_at 7.81406695193022
1552566_3p_at 6.47041417855867
1552575_3p_a_at 7.54374573085388

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139589.cel.gz 8.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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