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Sample GSM139578 Query DataSets for GSM139578
Status Public on Dec 19, 2008
Title HB41
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : pCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N0
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.7669974960427
117_3p_at 7.55186761263608
1494_3p_f_at 7.43530819305612
1552275_3p_s_at 7.10815512867605
1552281_3p_at 9.23676848906226
1552296_3p_at 5.93151969908551
1552302_3p_at 5.6074158803548
1552311_3p_a_at 8.20751531936586
1552321_3p_a_at 4.35887758895732
1552340_3p_at 6.77597154118623
1552343_3p_s_at 7.60799631678079
1552354_3p_at 7.23321903768831
1552476_3p_s_at 7.3323451163555
1552480_3p_s_at 3.63345804892179
1552504_3p_a_at 7.6898538307054
1552518_3p_s_at 5.89142935344189
1552528_3p_at 8.4645115694183
1552535_3p_at 8.13692316216152
1552566_3p_at 6.87021218310893
1552575_3p_a_at 7.82665396176833

Total number of rows: 61297

Table truncated, full table size 2187 Kbytes.




Supplementary file Size Download File type/resource
gsm139578.cel.gz 8.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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