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Sample GSM139574 Query DataSets for GSM139574
Status Public on Dec 19, 2008
Title HB37
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T3
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 9.28474940672778
117_3p_at 7.49371926886648
1494_3p_f_at 7.62481106533989
1552275_3p_s_at 7.51471641686504
1552281_3p_at 9.09377582101842
1552296_3p_at 5.58909709988081
1552302_3p_at 5.36537264823824
1552311_3p_a_at 8.30343105791441
1552321_3p_a_at 4.64243356689011
1552340_3p_at 6.50197330761303
1552343_3p_s_at 7.10336578185184
1552354_3p_at 7.30400403098046
1552476_3p_s_at 7.61250963412393
1552480_3p_s_at 3.53567464716819
1552504_3p_a_at 7.58366716174363
1552518_3p_s_at 5.08574462711014
1552528_3p_at 8.62359882873824
1552535_3p_at 7.98559592999707
1552566_3p_at 6.97887503137164
1552575_3p_a_at 7.7910353230689

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139574.cel.gz 8.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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