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Sample GSM139568 Query DataSets for GSM139568
Status Public on Dec 19, 2008
Title HB31
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T3
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.86392831972512
117_3p_at 7.84025669267443
1494_3p_f_at 7.60369595189618
1552275_3p_s_at 8.0604687750599
1552281_3p_at 9.23716560352378
1552296_3p_at 6.24026605585471
1552302_3p_at 5.95667056961143
1552311_3p_a_at 8.37162183703346
1552321_3p_a_at 4.43019654350775
1552340_3p_at 6.5557206479125
1552343_3p_s_at 8.86060104029526
1552354_3p_at 7.48541383019302
1552476_3p_s_at 7.5988323478867
1552480_3p_s_at 3.83775971457744
1552504_3p_a_at 7.55538330233426
1552518_3p_s_at 5.6239817082346
1552528_3p_at 8.37042962567456
1552535_3p_at 7.94295366719966
1552566_3p_at 6.67122132431928
1552575_3p_a_at 8.93191612638493

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139568.cel.gz 8.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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