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Sample GSM139562 Query DataSets for GSM139562
Status Public on Dec 19, 2008
Title HB25
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : Ep
Progesterone Receptor : Pp
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.78769667711637
117_3p_at 7.60762619992669
1494_3p_f_at 7.28812564803775
1552275_3p_s_at 7.70212948936667
1552281_3p_at 8.9888979667227
1552296_3p_at 6.01704615919404
1552302_3p_at 6.11478325025266
1552311_3p_a_at 8.23546683672383
1552321_3p_a_at 4.78831253752897
1552340_3p_at 6.37307805865459
1552343_3p_s_at 6.99953231082184
1552354_3p_at 7.51616454037868
1552476_3p_s_at 7.74748011429695
1552480_3p_s_at 3.42065451172549
1552504_3p_a_at 7.6311541836744
1552518_3p_s_at 5.60528411274283
1552528_3p_at 8.09706286936596
1552535_3p_at 7.89969739058476
1552566_3p_at 6.44508124284229
1552575_3p_a_at 8.69618909052013

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139562.cel.gz 8.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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