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Sample GSM139561 Query DataSets for GSM139561
Status Public on Dec 19, 2008
Title HB24
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : pCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T1
Node: N2
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.86637995469018
117_3p_at 7.59346941950212
1494_3p_f_at 7.41426165888697
1552275_3p_s_at 7.09591604523604
1552281_3p_at 9.3564916264718
1552296_3p_at 5.73012672757088
1552302_3p_at 5.85533319511728
1552311_3p_a_at 8.34619604998148
1552321_3p_a_at 4.5045602275911
1552340_3p_at 6.75357009924763
1552343_3p_s_at 7.96183847236536
1552354_3p_at 7.02227566104684
1552476_3p_s_at 7.34559684317498
1552480_3p_s_at 3.51454808428079
1552504_3p_a_at 7.70463309541308
1552518_3p_s_at 5.2345017356886
1552528_3p_at 8.34013182229156
1552535_3p_at 7.93400556571785
1552566_3p_at 6.8520304654503
1552575_3p_a_at 8.44252980051958

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139561.cel.gz 8.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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