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Sample GSM139560 Query DataSets for GSM139560
Status Public on Dec 19, 2008
Title HB23
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : Ep
Progesterone Receptor : P-
Size: T3
Node: N0
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.43069847974374
117_3p_at 7.42248299213871
1494_3p_f_at 7.38708186884015
1552275_3p_s_at 7.79500414295712
1552281_3p_at 9.065777288219
1552296_3p_at 6.07466920765256
1552302_3p_at 6.00110568722912
1552311_3p_a_at 8.32077097816458
1552321_3p_a_at 5.61991356612647
1552340_3p_at 6.54639326137005
1552343_3p_s_at 7.29563272308733
1552354_3p_at 8.21257467591373
1552476_3p_s_at 8.26243919660645
1552480_3p_s_at 3.47993586143422
1552504_3p_a_at 7.54290318571794
1552518_3p_s_at 5.64713081345073
1552528_3p_at 8.24419911304773
1552535_3p_at 7.81206539482643
1552566_3p_at 6.51580365269834
1552575_3p_a_at 8.36418471172382

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139560.cel.gz 8.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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