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Sample GSM139559 Query DataSets for GSM139559
Status Public on Dec 19, 2008
Title HB22
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : pCR
Estrogen Receptor : Ep
Progesterone Receptor : Pp
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.97662357493665
117_3p_at 7.79211484806715
1494_3p_f_at 7.58905744829012
1552275_3p_s_at 7.45350654689598
1552281_3p_at 9.20236848980074
1552296_3p_at 5.63088465872832
1552302_3p_at 5.76376126813126
1552311_3p_a_at 8.2922434541442
1552321_3p_a_at 4.8115471453538
1552340_3p_at 6.68970063241024
1552343_3p_s_at 7.84323375538814
1552354_3p_at 7.80235391667721
1552476_3p_s_at 8.1011011945234
1552480_3p_s_at 3.20472585982932
1552504_3p_a_at 7.698864094372
1552518_3p_s_at 5.73796511975815
1552528_3p_at 8.43872771428252
1552535_3p_at 7.92916111585135
1552566_3p_at 6.43121173118145
1552575_3p_a_at 8.93235268819214

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139559.cel.gz 8.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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