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Sample GSM139558 Query DataSets for GSM139558
Status Public on Dec 19, 2008
Title HB21
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : pCR
Estrogen Receptor : Ep
Progesterone Receptor : Pp
Size: T3
Node: N0
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.35999062713148
117_3p_at 7.85237125021755
1494_3p_f_at 7.50606924281276
1552275_3p_s_at 7.68653543255746
1552281_3p_at 9.17991428731146
1552296_3p_at 5.5823756569942
1552302_3p_at 5.79107166361632
1552311_3p_a_at 8.28541618339321
1552321_3p_a_at 4.90634962418512
1552340_3p_at 6.65858579239068
1552343_3p_s_at 6.98830424196112
1552354_3p_at 7.66649242226174
1552476_3p_s_at 7.91115046747682
1552480_3p_s_at 3.68986432900346
1552504_3p_a_at 7.64309848130896
1552518_3p_s_at 5.29307344670825
1552528_3p_at 8.10271981955848
1552535_3p_at 7.87176433076596
1552566_3p_at 6.77351420676851
1552575_3p_a_at 8.11442295335888

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139558.cel.gz 8.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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