NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM139545 Query DataSets for GSM139545
Status Public on Dec 19, 2008
Title HB08
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : Ep
Progesterone Receptor : Pn
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 9.08892523551068
117_3p_at 7.3364233709698
1494_3p_f_at 7.36917662454096
1552275_3p_s_at 7.58321109952082
1552281_3p_at 9.037827221885
1552296_3p_at 6.09069953866173
1552302_3p_at 6.09411060937759
1552311_3p_a_at 8.28235017968759
1552321_3p_a_at 8.2983876878849
1552340_3p_at 6.726880744488
1552343_3p_s_at 7.0937511687391
1552354_3p_at 7.23168676340857
1552476_3p_s_at 7.43047576524114
1552480_3p_s_at 3.64157232318363
1552504_3p_a_at 7.38352720548333
1552518_3p_s_at 5.29844596329373
1552528_3p_at 8.27181030076417
1552535_3p_at 7.88965347697093
1552566_3p_at 6.80022959400294
1552575_3p_a_at 7.91563951323385

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139545.cel.gz 8.5 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap