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Sample GSM139543 Query DataSets for GSM139543
Status Public on Dec 19, 2008
Title HB06
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : pCR
Estrogen Receptor : Ep
Progesterone Receptor : Pp
Size: T3
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.68706477071343
117_3p_at 7.55081613114092
1494_3p_f_at 7.43126205071936
1552275_3p_s_at 7.899382083995
1552281_3p_at 9.03798200731136
1552296_3p_at 6.13955569929846
1552302_3p_at 6.05634852711884
1552311_3p_a_at 8.45582903766772
1552321_3p_a_at 4.92358438014364
1552340_3p_at 6.62178704557744
1552343_3p_s_at 7.08914531794054
1552354_3p_at 7.2953893734976
1552476_3p_s_at 7.76194061517814
1552480_3p_s_at 3.64750650843699
1552504_3p_a_at 7.79498541022726
1552518_3p_s_at 5.8809651762467
1552528_3p_at 8.31785943979241
1552535_3p_at 7.77430712990514
1552566_3p_at 6.65053068006872
1552575_3p_a_at 9.82936778627948

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139543.cel.gz 8.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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