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GEO accession:
Sample GSM139120
Query DataSets for GSM139120
Status
Public on Apr 09, 2007
Title
Normal_Ovary_1043N
Sample type
RNA
Source name
Normal_Ovary
Organism
Mus musculus
Characteristics
Strain: C57BL6/J (with Apc loxP/loxP and Pten loxP/loxP)
Gender: Female
Extracted molecule
total RNA
Extraction protocol
Total RNA was extracted from the tissue lysate using an RNeasy kit (Qiagen).
Label
biotin
Label protocol
3-5 µg of total RNA was processed to produce biotinylated cRNA targets.
Hybridization protocol
standard Affymetrix procedures
Scan protocol
standard Affymetrix procedures
Description
Tissue: Normal ovary
Data processing
Ann Arbor quantile-normalized trimmed-mean method
Submission date
Oct 06, 2006
Last update date
Aug 28, 2018
Contact name
Rork Kuick
E-mail(s)
[email protected]
Phone
734-936-9241
Organization name
University of Michigan
Street address
University of Michigan, SPH II, 1415 Washington Heights, Room M2533
City
Ann Arbor
State/province
MI
ZIP/Postal code
48109-2029
Country
USA
Platform ID
GPL1261
Series (1)
GSE5987
Mouse model of Endometrioid Ovarian Adenocarcinomas by conditional inactivation of PTEN and APC genes
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
quantile-normalized trimmed-mean, log-transformed with log(max(x+50,0)+50) using base 10 logarithms
Data table
ID_REF
VALUE
1415670_at
3.600428326
1415671_at
3.597914471
1415672_at
3.905472062
1415673_at
2.7355989
1415674_a_at
3.266466895
1415675_at
3.334654767
1415676_a_at
3.857091155
1415677_at
3.096910013
1415678_at
3.563362409
1415679_at
3.867585327
1415680_at
3.596597096
1415681_at
3.421768401
1415682_at
3.28510703
1415683_at
3.76604086
1415684_at
3.343605508
1415685_at
3.180412633
1415686_at
3.689220037
1415687_a_at
4.237443195
1415688_at
3.802089258
1415689_s_at
3.670060217
Total number of rows:
45101
Table truncated, full table size
1020 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM139120.CEL.gz
6.2 Mb
(ftp)
(http)
CEL
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