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GEO accession:
Sample GSM135553
Query DataSets for GSM135553
Status
Public on Sep 10, 2007
Title
Ler_rep1
Sample type
RNA
Source name
10 day old wild type Landsberg erecta seedlings
Organism
Arabidopsis thaliana
Characteristics
Age: 10 day old seedlings
Genotype: Landsberg erecta, wild type
Extracted molecule
total RNA
Label
biotin
Description
10 day old Ler seedlings grown at 22 degrees Celsius in 16 hrs cool white light (120 µmol/m2sec)
Data processing
MAS 5.0 algorithm implemented in Bioconductor using the Affy package
Submission date
Sep 10, 2006
Last update date
Aug 28, 2018
Contact name
Doris Wagner
E-mail(s)
[email protected]
Phone
215-898-0483
Organization name
University of Pennsylvania
Department
Biology
Street address
City
Philadelphia
State/province
PA
ZIP/Postal code
19104
Country
USA
Platform ID
GPL198
Series (1)
GSE5806
Identification of differentially expressed genes in brm-101 and syd-2 mutants
Relations
Reanalyzed by
GSE119083
Data table header descriptions
ID_REF
VALUE
Signal intensity
ABS_CALL
Detection call
DETECTION P-VALUE
Detection p-value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
244901_at
53.39522137
A
0.091157283
244902_at
53.09681258
P
0.030941813
244903_at
405.8774964
P
0.001672877
244904_at
130.5219472
A
0.077429964
244905_at
14.37322887
A
0.788201896
244906_at
126.7451814
A
0.123873163
244907_at
27.12584396
A
0.570568468
244908_at
12.75905823
A
0.703144167
244909_at
9.166764492
A
0.835967604
244910_s_at
8.540412788
A
0.53542366
244911_at
2.658877598
A
0.908842717
244912_at
1900.195962
P
0.001672877
244913_at
4.618230479
A
0.974769764
244914_at
5.546143829
A
0.813027629
244915_s_at
3.09974391
A
0.986884425
244916_at
67.66103812
M
0.045580371
244917_at
2.926773119
A
0.922570036
244918_at
3.649289337
A
0.813027629
244919_at
34.90493068
A
0.328321007
244920_s_at
83.96088806
A
0.164032396
Total number of rows:
22810
Table truncated, full table size
799 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM135553.CEL.gz
3.1 Mb
(ftp)
(http)
CEL
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