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Sample GSM131429 Query DataSets for GSM131429
Status Public on Jan 08, 2007
Title AtGen_6-8423_Woundingstress-Roots-6.0h_Rep1
Sample type RNA
 
Source name Col-0
Organism Arabidopsis thaliana
Characteristics Stock Code: N1092
Tissue: Roots
Treatment protocol At day 16, stress treatment started at 3 hours of light treatment.
Wounding stress (Punctured with pins), Group Harter
Extracted molecule total RNA
Label biotin
 
Description location: Growth Room
Atmosphere: Normal
Humidity: 50%
Temperature: 24
Lighting: 16 hour days
Medium: Murashige and Skoog
Water: N/A
Data processing The data were analysed using Affymetrix Microarray Suite 5.0 (MAS5)
 
Submission date Aug 25, 2006
Last update date Aug 28, 2018
Contact name Nottingham Arabidopsis Stock Centre (NASC)
E-mail(s) [email protected]
Phone +44 (0)115 951 3237
Fax +44 (0)115 951 3297
URL http://arabidopsis.info/
Organization name Nottingham Arabidopsis Stock Centre (NASC)
Department School of Biosciences, University of Nottingham
Street address Sutton Bonington Campus
City Loughborough
ZIP/Postal code LE12 5RD
Country United Kingdom
 
Platform ID GPL198
Series (1)
GSE5627 AtGenExpress: Stress Treatments (Wounding stress)
Relations
Reanalyzed by GSE118579
Reanalyzed by GSE119083

Data table header descriptions
ID_REF
VALUE This is the final calculated measurement for each probe set identifier that has been made comparable across all samples and rows
ABS_CALL A qualitative measurement indicating if the probe set is detected
DETECTION P-VALUE A p-value indicating the significance of the Detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-r2-P1-cre-5_at 2.36208300781250E+003 P 2.44141003349796E-004
AFFX-r2-P1-cre-3_at 2.79769433593750E+003 P 2.44141003349796E-004
AFFX-r2-Ec-bioD-5_at 3.59270568847656E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioD-3_at 5.49410217285156E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioC-5_at 1.31209335327148E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioC-3_at 1.53323501586914E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-M_at 7.96089019775391E+001 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-5_at 6.59858398437500E+001 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-3_at 5.35896911621094E+001 P 2.44141003349796E-004
AFFX-r2-Bs-thr-M_s_at 9.83557164669037E-001 A 7.25830018520355E-001
AFFX-r2-Bs-thr-5_s_at 3.39886283874512E+000 A 3.03710997104645E-001
AFFX-r2-Bs-thr-3_s_at 5.71515619754791E-001 A 8.88427972793579E-001
AFFX-r2-Bs-phe-M_at 3.69234710931778E-001 A 6.96289002895355E-001
AFFX-r2-Bs-phe-5_at 1.81637182831764E-001 A 9.69726979732513E-001
AFFX-r2-Bs-phe-3_at 1.09252381324768E+000 A 3.66210997104645E-001
AFFX-r2-Bs-lys-M_at 8.59278559684753E-001 A 4.32372987270355E-001
AFFX-r2-Bs-lys-5_at 2.04115128517151E+000 A 2.74170011281967E-001
AFFX-r2-Bs-lys-3_at 5.58523273468018E+000 P 1.85547005385160E-002
AFFX-r2-Bs-dap-M_at 1.07523143291473E-001 A 9.19434010982513E-001
AFFX-r2-Bs-dap-5_at 3.02679717540741E-001 A 9.32372987270355E-001

Total number of rows: 22810

Table truncated, full table size 1250 Kbytes.




Supplementary file Size Download File type/resource
GSM131429.CEL.gz 2.3 Mb (ftp)(http) CEL

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