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Sample GSM131405 Query DataSets for GSM131405
Status Public on Jan 08, 2007
Title AtGen_6-7521_UV-Bstress-Roots-12.0h_Rep1
Sample type RNA
 
Source name Col-0
Organism Arabidopsis thaliana
Characteristics Stock Code: N1092
Tissue: Roots
Treatment protocol At day 16, stress treatment started at 3 hours of light treatment.
UV-B stress (15 min. 1.18 W/m2 Philips TL40W/12), Group Harter
Extracted molecule total RNA
Label biotin
 
Description location: Growth Room
Atmosphere: Normal
Humidity: 50%
Temperature: 24
Lighting: 16 hour days
Medium: Murashige and Skoog
Water: N/A
Data processing The data were analysed using Affymetrix Microarray Suite 5.0 (MAS5)
 
Submission date Aug 25, 2006
Last update date Aug 28, 2018
Contact name Nottingham Arabidopsis Stock Centre (NASC)
E-mail(s) [email protected]
Phone +44 (0)115 951 3237
Fax +44 (0)115 951 3297
URL http://arabidopsis.info/
Organization name Nottingham Arabidopsis Stock Centre (NASC)
Department School of Biosciences, University of Nottingham
Street address Sutton Bonington Campus
City Loughborough
ZIP/Postal code LE12 5RD
Country United Kingdom
 
Platform ID GPL198
Series (1)
GSE5626 AtGenExpress: Stress Treatments (UV-B stress)
Relations
Reanalyzed by GSE118579
Reanalyzed by GSE119083

Data table header descriptions
ID_REF
VALUE This is the final calculated measurement for each probe set identifier that has been made comparable across all samples and rows
ABS_CALL A qualitative measurement indicating if the probe set is detected
DETECTION P-VALUE A p-value indicating the significance of the Detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-r2-P1-cre-5_at 2.62926806640625E+003 P 2.44141003349796E-004
AFFX-r2-P1-cre-3_at 2.92869091796875E+003 P 2.44141003349796E-004
AFFX-r2-Ec-bioD-5_at 3.92459594726562E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioD-3_at 5.17990295410156E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioC-5_at 1.69780563354492E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioC-3_at 1.84324310302734E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-M_at 1.06213684082031E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-5_at 7.94390869140625E+001 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-3_at 5.30958557128906E+001 P 2.44141003349796E-004
AFFX-r2-Bs-thr-M_s_at 8.98728489875793E-001 A 7.80517995357513E-001
AFFX-r2-Bs-thr-5_s_at 3.01821255683899E+000 A 4.66064006090164E-001
AFFX-r2-Bs-thr-3_s_at 1.12749743461609E+000 A 7.53906011581421E-001
AFFX-r2-Bs-phe-M_at 3.52742910385132E-001 A 5.33936023712158E-001
AFFX-r2-Bs-phe-5_at 1.41484010219574E+000 A 6.96289002895355E-001
AFFX-r2-Bs-phe-3_at 8.66140604019165E-001 A 6.96289002895355E-001
AFFX-r2-Bs-lys-M_at 1.90240055322647E-001 A 6.33789002895355E-001
AFFX-r2-Bs-lys-5_at 1.50903618335724E+000 A 6.01073980331421E-001
AFFX-r2-Bs-lys-3_at 5.45948171615601E+000 P 8.05663969367743E-003
AFFX-r2-Bs-dap-M_at 2.85332709550858E-001 A 8.50341975688934E-001
AFFX-r2-Bs-dap-5_at 3.42336595058441E-001 A 8.70360970497131E-001

Total number of rows: 22810

Table truncated, full table size 1250 Kbytes.




Supplementary file Size Download File type/resource
GSM131405.CEL.gz 2.2 Mb (ftp)(http) CEL

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