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Sample GSM1301546 Query DataSets for GSM1301546
Status Public on Jan 07, 2014
Title biopsy_ID: P19-03
Sample type RNA
 
Source name follicular lymphoma
Organism Homo sapiens
Characteristics tissue: Tumor (lymph node)
Extracted molecule total RNA
Extraction protocol total RNA was extracted from fresh frozen whole tissue sections using the Stratagene Absolute RNA Miniprep Kitaccording to manufacturer's guidelines
Label biotin
Label protocol cRNA was produced and labeled with biotin according to the manufacturer's (Affymetrix) guidelines
 
Hybridization protocol cRNA was fragmented and hybridized according to the manufacturer's (Affymetrix) guidelines
Scan protocol GeneChips were scanned using a standard scanning protocol recommended by the manufacturer (Affymetrix)
Description Fresh frozen tumor tissue sample
Data processing Quantile normalization of gene expression data from each individual array was performed using the GCOS/Expression Console
 
Submission date Jan 06, 2014
Last update date Jan 28, 2023
Contact name Marianne Brodtkorb
E-mail(s) [email protected]
Organization name Oslo University Hospital
Department Institute for Cancer Research, The Norwegian Radium Hospital
Lab Department of Immunology
Street address Ullernchausseen 70
City Oslo
ZIP/Postal code 0379
Country Norway
 
Platform ID GPL570
Series (1)
GSE53820 Gene expression data from serial samples of follicular lymphoma (FLSB - follicular lymphoma serial biopsies)

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1007_s_at 7.124641
1053_at 8.036649
117_at 5.355988
121_at 7.687466
1255_g_at 2.762722
1294_at 8.045529
1316_at 4.682694
1320_at 4.423001
1405_i_at 10.654
1431_at 3.336031
1438_at 5.375026
1487_at 7.590687
1494_f_at 6.066528
1552256_a_at 9.015607
1552257_a_at 7.655412
1552258_at 4.380403
1552261_at 3.741577
1552263_at 7.360642
1552264_a_at 8.390331
1552266_at 2.958358

Total number of rows: 54675

Table truncated, full table size 1052 Kbytes.




Supplementary file Size Download File type/resource
GSM1301546_serialFL_L380_02.CEL.gz 4.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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