NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1290595 Query DataSets for GSM1290595
Status Public on Jan 05, 2014
Title msi2-1
Sample type RNA
 
Source name Bone marrow
Organism Mus musculus
Characteristics cell type: LSK
genotype: Msi2KO
Extracted molecule total RNA
Extraction protocol RNA was extracted using TRIZOL and RNEASY RNA extraction kit
Label Biotin
Label protocol Standard Affymetrix protocol
 
Hybridization protocol Standard Affymetrix protocol
Scan protocol Standard Affymetrix protocol
Description Mouse LSK cells, conditional Msi2 KO, replicate 1
Data processing Signal normalization was performed with RMA method
 
Submission date Dec 17, 2013
Last update date Jan 05, 2014
Contact name Yuheng Lu
Organization name Memorial Sloan Kettering Cancer Center
Street address 417 East 68th Street
City New York
State/province NY
ZIP/Postal code 10065
Country USA
 
Platform ID GPL1261
Series (1)
GSE53385 Gene expression from normal and Msi2 KO mouse LSK cells

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1415670_at 10.4452973564091
1415671_at 9.35666760928956
1415672_at 9.22643006474667
1415673_at 7.87706792021164
1415674_a_at 8.82689279185725
1415675_at 7.52467165716355
1415676_a_at 9.36936148674149
1415677_at 7.04668758134065
1415678_at 8.83604962259313
1415679_at 9.81477332651365
1415680_at 7.57874562775574
1415681_at 9.04517964680017
1415682_at 9.07043316653706
1415683_at 8.93785717169907
1415684_at 4.60398919657515
1415685_at 7.21715657821087
1415686_at 9.80650230263604
1415687_a_at 9.01459349586652
1415688_at 8.18750044351259
1415689_s_at 7.77214423641098

Total number of rows: 45101

Table truncated, full table size 945 Kbytes.




Supplementary file Size Download File type/resource
GSM1290595_5.042911_Mouse430_2.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap