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Sample GSM1288780 Query DataSets for GSM1288780
Status Public on Dec 12, 2014
Title CDR131_sham
Sample type RNA
 
Source name C57Bl/6N_Sham-operated control
Organism Mus musculus
Characteristics strain: C57Bl/6N
gender: male
subjected to: sham operation (control)
tissue: left ventricles
Treatment protocol Angiotensin II infusion in mini-osmotic pumps implanted sub-cutaneously, treated 48 hours.
Extracted molecule total RNA
Extraction protocol RNA was extracted with Rneasy microkit with DNase I treatment in accordance with the prescribed protocol (fibrous tissue) provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description CDR131
Data processing quantile normalisation with package preprocessCore 1.25.3
 
Submission date Dec 12, 2013
Last update date Dec 12, 2014
Contact name Sophie Cardin
E-mail(s) [email protected]
Phone 514-987-5760
Organization name IRCM
Department Experimental medecine
Lab CFDeschepper
Street address 110, Pine west
City Montreal
State/province Qc
ZIP/Postal code H2W1R7
Country Canada
 
Platform ID GPL15097
Series (1)
GSE53269 Gene expression profiling in left cardiac ventricles of C57Bl/6J and C57Bl/6N male mice treated for 48 h with angiotensin II 500 ng/kg/min.

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
0610006I08RIK 2829.9255 0
0610007C21RIK 1698.051071 0
0610007P08RIK 148.0867714 0
0610007P14RIK 199.2169071 0
0610007P22RIK 225.6531286 0
0610008C08RIK 108.4244129 0.01378446
0610009B22RIK 392.2472 0
0610009D07RIK 65.79129571 0.4655279
0610009O20RIK 1546.975143 0
0610010D20RIK 63.78449214 0.3662736
0610010E21RIK 633.1304571 0
0610010K06RIK 1411.383929 0
0610010K14RIK 235.9380786 0
0610011L14RIK 89.41943786 0.0651629
0610012A05RIK 97.16556714 0.03884712
0610012D14RIK 87.28872429 0.01368082
0610012G03RIK 2256.4895 0
0610012H03RIK 75.117755 0.1451781
0610013E23RIK 98.70814143 0.03884712
0610025P10RIK 199.7694 0

Total number of rows: 18138

Table truncated, full table size 474 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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