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Sample GSM128780 Query DataSets for GSM128780
Status Public on Aug 15, 2006
Title Somerville_1-3_leaf-GH2_Rep2_ATH1
Sample type RNA
 
Source name Col-0
Organism Arabidopsis thaliana
Characteristics Stock Code: N1092
Developmental stage: 15 days after germination
Tissue: rosette leaf
Extracted molecule total RNA
Label biotin
 
Description growth space: greenhouse
light intensity: 125 umol m-2s-1
light source: fluorescence
light regime: long day
photoperiod: 16 hr
day temperature: 25 C
night temperature: 20 C
Data processing The data were analysed using Affymetrix Microarray Suite 5.0 (MAS5)
 
Submission date Aug 15, 2006
Last update date Aug 28, 2018
Contact name Nottingham Arabidopsis Stock Centre (NASC)
E-mail(s) [email protected]
Phone +44 (0)115 951 3237
Fax +44 (0)115 951 3297
URL http://arabidopsis.info/
Organization name Nottingham Arabidopsis Stock Centre (NASC)
Department School of Biosciences, University of Nottingham
Street address Sutton Bonington Campus
City Loughborough
ZIP/Postal code LE12 5RD
Country United Kingdom
 
Platform ID GPL198
Series (1)
GSE5533 Tissue Type Arrays of Columbia-0
Relations
Reanalyzed by GSE119083

Data table header descriptions
ID_REF
VALUE This is the final calculated measurement for each probe set identifier that has been made comparable across all samples and rows
ABS_CALL A qualitative measurement indicating if the probe set is detected
DETECTION P-VALUE A p-value indicating the significance of the Detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-r2-P1-cre-5_at 1.08229511718750E+004 P 2.44141003349796E-004
AFFX-r2-P1-cre-3_at 1.05605644531250E+004 P 2.44141003349796E-004
AFFX-r2-Ec-bioD-5_at 2.25820263671875E+003 P 2.44141003349796E-004
AFFX-r2-Ec-bioD-3_at 2.67033203125000E+003 P 2.44141003349796E-004
AFFX-r2-Ec-bioC-5_at 6.66808959960938E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioC-3_at 7.28508911132813E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-M_at 1.80425415039063E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-5_at 1.69876541137695E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-3_at 2.28480453491211E+002 P 2.44141003349796E-004
AFFX-r2-Bs-thr-M_s_at 8.96971607208252E+000 A 6.65526986122131E-001
AFFX-r2-Bs-thr-5_s_at 5.05910682678223E+000 A 2.46094003319740E-001
AFFX-r2-Bs-thr-3_s_at 1.03715622425079E+000 A 9.43848013877869E-001
AFFX-r2-Bs-phe-M_at 2.32854032516479E+000 A 5.67627012729645E-001
AFFX-r2-Bs-phe-5_at 2.22623467445374E-001 A 8.50341975688934E-001
AFFX-r2-Bs-phe-3_at 2.72807812690735E+000 A 7.25830018520355E-001
AFFX-r2-Bs-lys-M_at 9.33546447753906E+000 A 5.00000000000000E-001
AFFX-r2-Bs-lys-5_at 2.96676898002625E+000 A 5.00000000000000E-001
AFFX-r2-Bs-lys-3_at 1.11289367675781E+001 A 3.03710997104645E-001
AFFX-r2-Bs-dap-M_at 3.40590506792068E-001 A 9.89257991313934E-001
AFFX-r2-Bs-dap-5_at 3.74373507499695E+000 A 6.33789002895355E-001

Total number of rows: 22810

Table truncated, full table size 1250 Kbytes.




Supplementary file Size Download File type/resource
GSM128780.CEL.gz 3.2 Mb (ftp)(http) CEL

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