|
| Status |
Public on Nov 07, 2013 |
| Title |
DU145_VprBPsh_rep1 |
| Sample type |
RNA |
| |
|
| Source name |
Bladder cancer cells
|
| Organism |
Homo sapiens |
| Characteristics |
cell type: Bladder cancer
treatment: VprBP-depleted
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA was isolated using the TRIzol reagent according to the manufacturer's instructinos.
|
| Label |
biotin
|
| Label protocol |
Biotinylated cRNA was prepared with the Ambion MessageAmp kit for Illumina array.
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol.
|
| Scan protocol |
Standard Illumina scanning protocol.
|
| Description |
replicate 1
|
| Data processing |
The data were processed and anlayzed by the Array Pipe software.
|
| |
|
| Submission date |
Aug 28, 2013 |
| Last update date |
Nov 07, 2013 |
| Contact name |
Kyunghwan Kim |
| E-mail(s) |
[email protected]
|
| Phone |
3234424477
|
| Organization name |
University of Southern California
|
| Department |
Biochemistry and Molecular Biology
|
| Street address |
1450 Biggy Street NRT6517
|
| City |
Los Angeles |
| State/province |
California |
| ZIP/Postal code |
90033 |
| Country |
USA |
| |
|
| Platform ID |
GPL10558 |
| Series (1) |
| GSE50414 |
Genome-wide expression analysis of VprBP knockdown in DU145 cells |
|
