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GEO accession:
Sample GSM12069
Query DataSets for GSM12069
Status
Public on Nov 25, 2003
Title
C001 Renal Clear Cell Carcinoma U133B
Sample type
RNA
Source name
Trizol isolation of total RNA from Renal Clear Cell Carcinoma tissue
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Age = 58; Gender = Male; Left Kidney; Tumor Type = clear cell; Tumor Fuhrman Grade = 1; Tumor Capsule Penetration = true; Tumor Perinephric Fat Invasion = false; Tumor Renal Sinus Invasion = false; Tumor Renal Vein Invasion = false; Tumor Location: lower; Scaling Target = 500; Scaling Factor = 11.56; Raw Q = 2.72; Noise = 3.47; Background = 68.43.
Keywords = kidney
Keywords = renal
Keywords = RCC
Keywords = carcinoma
Keywords = cancer
Lot batch = 2002912
Submission date
Oct 22, 2003
Last update date
May 28, 2005
Contact name
Marc E. Lenburg
E-mail(s)
[email protected]
Phone
617-414-1375
Fax
617-414-1646
URL
http://gg.bu.edu
Organization name
Boston University School of Medicine
Department
Genetics and Genomics
Street address
715 Albany Street, E613B
City
Boston
State/province
MA
ZIP/Postal code
02130
Country
USA
Platform ID
GPL97
Series (1)
GSE781
Normal and Renal Cell Carcinoma Kidney Tissue, Human
Data table header descriptions
ID_REF
VALUE
MAS 5.0 Statistical Algorithm (mean scaled to 500)
ABS_CALL
MAS 5.0 Absent, Marginal, Present call with Alpha1 = 0.05, Alpha2 = 0.065
Data table
ID_REF
VALUE
ABS_CALL
AFFX-BioB-5_at
1100.4
P
AFFX-BioB-M_at
2094
P
AFFX-BioB-3_at
941.1
P
AFFX-BioC-5_at
2508.2
P
AFFX-BioC-3_at
1325.9
P
AFFX-BioDn-5_at
2632.8
P
AFFX-BioDn-3_at
12868.2
P
AFFX-CreX-5_at
25184.4
P
AFFX-CreX-3_at
35899.3
P
AFFX-DapX-5_at
44.5
A
AFFX-DapX-M_at
74.6
A
AFFX-DapX-3_at
34.4
A
AFFX-LysX-5_at
7.6
A
AFFX-LysX-M_at
98.3
A
AFFX-LysX-3_at
42.9
A
AFFX-PheX-5_at
22.5
A
AFFX-PheX-M_at
30.3
A
AFFX-PheX-3_at
91.3
A
AFFX-ThrX-5_at
36.5
A
AFFX-ThrX-M_at
30.1
A
Total number of rows:
22645
Table truncated, full table size
398 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM12069.CEL.gz
3.3 Mb
(ftp)
(http)
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