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Sample GSM114621 Query DataSets for GSM114621
Status Public on Jul 01, 2006
Title Voluntary exercise, cardiac tissue, 16 months old 4
Sample type RNA
 
Source name Heart left ventricle in female Sprague-Dawley rats after lifelong exerise
Organism Rattus norvegicus
Characteristics Gender: Female, Strain: Sprague-Dawley (Charles River)
Age: 16 months; Tissue: Heart left ventricle
Treatment protocol Reference Schweitzer et al. Access to exercise and its relation to cardiovascular health and gene expression in laboratory animals. Life Sciences 77: 2246-2261, 2005.
Growth protocol Reference Schweitzer et al. Access to exercise and its relation to cardiovascular health and gene expression in laboratory animals. Life Sciences 77: 2246-2261, 2005.
Extracted molecule total RNA
Extraction protocol Total RNA extraction was performed using a RNeasy Fibrous Tissue Mini kit (Qiagen) according to the manufacturer's recommendations.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol High integrity RNA was hybridized to the Affymetix GeneChip® Rat Genome 230 2.0 Array
Scan protocol Arrays were scanned using the GeneArray scanner (Agilent Technologies)
Description Gene expression data from female Sprague-Dawley rats that had access to regular exercise (EX)
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) and RMA Express.
 
Submission date Jun 15, 2006
Last update date Jun 15, 2006
Contact name Natalie Schweitzer
E-mail(s) [email protected]
Phone 513-280-0190
Fax 513-529-5006
Organization name Miami University
Street address
City Oxford
State/province OH
ZIP/Postal code 45056
Country USA
 
Platform ID GPL1355
Series (1)
GSE5085 Expression data from female SD rats with access to lifelong exercise

Data table header descriptions
ID_REF probesets
VALUE RMA

Data table
ID_REF VALUE
1373053_at 6.05
1368494_at 7.14
1395945_at 3.64
1370442_at 5.59
1369306_at 5.98
1393387_at 7.49
1368248_at 6.96
1397164_at 6.17
1368826_at 7.21
1383585_s_at 8.69
1384431_at 4.84
1377133_at 3.97
1378857_at 6.11
1381147_at 5.99
1387965_at 3.06
1379092_at 5.74
1369074_at 2.94
1382278_at 6.38
1376780_at 7.54
1392166_at 3.95

Total number of rows: 31099

Table truncated, full table size 488 Kbytes.




Supplementary data files not provided

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