GEO Accession viewer

NCBI > GEO > Accession Display

Not logged in | Login

GEO help: Mouse over screen elements for information.

Sample GSM108371

Query DataSets for GSM108371

Status

Public on Jun 27, 2006

Title

M980513_A

Sample type

RNA

Source name

culture of cutaneous metastasis of melanoma

Organism

Homo sapiens

Characteristics

Gender: female
Source tissue: cutaneous metastasis of melanoma
Tumor stage: IV
BRAF: BRAFV600E
NRAS: wt

Extracted molecule

total RNA

Label

biotin

Description

Culture was derived from a cutanous metastasis of melanoma of the left iliac.

Data processing

MAS5.0

Submission date

May 11, 2006

Last update date

Jun 27, 2006

Contact name

Keith S Hoek

E-mail(s)

[email protected]

URL

http://www.jurmo.ch/work.html

Organization name

Currently unaffilliated

Street address

private

City

Zürich

ZIP/Postal code

8004

Country

Switzerland

Platform ID

GPL96

Series (2)

GSE4840	Metastatic potential of melanomas defined by specific gene expression profiles with no BRAF signature (Zürich).
GSE4845	Metastatic potential of melanomas defined by specific gene expression profiles with no BRAF signature.

Data table header descriptions
ID_REF
VALUE	Scaled signal intensity data
ABS_CALL	Detection call: Present (P), Marginal (M) or Absent (A)

Data table
ID_REF	VALUE	ABS_CALL
AFFX-BioB-5_at	415.4	P
AFFX-BioB-M_at	947.3	P
AFFX-BioB-3_at	418	P
AFFX-BioC-5_at	1031.3	P
AFFX-BioC-3_at	894.5	P
AFFX-BioDn-5_at	944.7	P
AFFX-BioDn-3_at	7180.3	P
AFFX-CreX-5_at	9950	P
AFFX-CreX-3_at	15206.6	P
AFFX-DapX-5_at	31.9	A
AFFX-DapX-M_at	55.3	A
AFFX-DapX-3_at	4.6	A
AFFX-LysX-5_at	27.4	A
AFFX-LysX-M_at	28.4	A
AFFX-LysX-3_at	11.6	A
AFFX-PheX-5_at	3.2	A
AFFX-PheX-M_at	3.7	A
AFFX-PheX-3_at	55.2	A
AFFX-ThrX-5_at	10.9	A
AFFX-ThrX-M_at	12.1	A

Total number of rows: 22283

Table truncated, full table size 401 Kbytes.

Supplementary data files not provided