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Sample GSM1068381 Query DataSets for GSM1068381
Status Public on May 01, 2013
Title db_48 weeks_fasted_rep_3 [muscle]
Sample type RNA
 
Source name muscle
Organism Mus musculus
Characteristics age: 48 weeks
fasting status: fasted
strain: B6.BKS(D)-Lep rdb/J
diet: D12450B
tissue: muscle
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Standard Illumina labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Sample name: 36M
Data processing The data were quantile normalised using lumi library in R
 
Submission date Jan 23, 2013
Last update date May 01, 2013
Contact name Krzysztof Goryca
Organization name Uniwersytet Warszawski
Department CeNT
Street address Banacha 2c
City Warszawa
ZIP/Postal code 02-097
Country Poland
 
Platform ID GPL6885
Series (1)
GSE43691 Hepatic molecular alterations more than muscle's differentiate obese hyperphagic mice from those prolonged fed with the high-fat diet

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 3586.545833 0
ILMN_2721178 705.1895833 0
ILMN_3033922 752.9833333 0
ILMN_3092673 2848.889583 0
ILMN_2816356 115.5166667 0
ILMN_2808939 136.9520833 0
ILMN_2634564 384.7583333 0
ILMN_2737647 62.96666667 0.25188
ILMN_2734484 561.3020833 0
ILMN_2952292 87.49375 0.01128
ILMN_2699078 45.67083333 0.98997
ILMN_1213681 478.9416667 0
ILMN_2735413 78.24375 0.03258
ILMN_2735415 109.0385417 0
ILMN_2891688 971.3072917 0
ILMN_2637698 676.3645833 0
ILMN_2674228 271.4375 0
ILMN_2601546 68.81041667 0.10652
ILMN_1230831 67.56666667 0.12907
ILMN_2848071 73.9875 0.05639

Total number of rows: 25697

Table truncated, full table size 749 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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