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Sample GSM1068291 Query DataSets for GSM1068291
Status Public on May 01, 2013
Title db_16 weeks_fasted_rep_1 [liver]
Sample type RNA
 
Source name liver
Organism Mus musculus
Characteristics age: 16 weeks
fasting status: fasted
strain: B6.BKS(D)-Lep rdb/J
diet: D12450B
tissue: liver
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN RNeasy Lipid Tissue mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Standard Illumina labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Sample name: 10W
Data processing The data were quantile normalised using lumi library in R
 
Submission date Jan 23, 2013
Last update date May 01, 2013
Contact name Krzysztof Goryca
Organization name Uniwersytet Warszawski
Department CeNT
Street address Banacha 2c
City Warszawa
ZIP/Postal code 02-097
Country Poland
 
Platform ID GPL6885
Series (1)
GSE43691 Hepatic molecular alterations more than muscle's differentiate obese hyperphagic mice from those prolonged fed with the high-fat diet

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 2913.204167 0
ILMN_2721178 820.61875 0
ILMN_3033922 1787.172917 0
ILMN_3092673 6778.970833 0
ILMN_2816356 103.2166667 0.02757
ILMN_2808939 826.2395833 0
ILMN_2634564 486.1333333 0
ILMN_2737647 85.08333333 0.17168
ILMN_2734484 427.7854167 0
ILMN_2952292 156.046875 0
ILMN_2699078 66.91979167 0.80326
ILMN_1213681 298.925 0
ILMN_2735413 729.3 0
ILMN_2735415 1005.402083 0
ILMN_2891688 824.6666667 0
ILMN_2637698 604.475 0
ILMN_2674228 263.3125 0
ILMN_2601546 90.77916667 0.1015
ILMN_1230831 74.91666667 0.44361
ILMN_2848071 628.1520833 0

Total number of rows: 25697

Table truncated, full table size 754 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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