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Sample GSM1065051 Query DataSets for GSM1065051
Status Public on Jan 17, 2013
Title Hypothalamus from control rats
Sample type RNA
 
Source name Rat hypothalamus
Organism Rattus norvegicus
Characteristics strain: Wistar
age: 4 months
tissue: Hypothalamus
diet: standard
rats: control rats
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the manufacturer's instructions
Label biotin
Label protocol Biotinylated cRNA were prepared with the TargetAmp Nano-g Biotin-aRNA Labeling for Illumina System
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Hyp control
Data processing The data were normalised using cubic spline normalisation with GenomeStudio (Illumina)
 
Submission date Jan 16, 2013
Last update date Jan 17, 2013
Contact name christophe breton
E-mail(s) [email protected]
Phone +33(0)320436532
Organization name University of Lille 1
Street address Cité Scientifique
City Villeneuve d'Ascq
ZIP/Postal code 59650
Country France
 
Platform ID GPL6101
Series (1)
GSE43547 Genome-wide analysis of hypothalamic gene expression in prenatally undernourished male rat offspring under high fat diet

Data table header descriptions
ID_REF
VALUE cubic spline normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1369537 211.5462 0.004848485
ILMN_1358051 184.3737 0.0169697
ILMN_1361746 157.9145 0.1854545
ILMN_1351370 160.5669 0.1454545
ILMN_1357910 146.4447 0.5236363
ILMN_1352975 2023.07 0
ILMN_1368384 202.2497 0.006060606
ILMN_1355285 175.8899 0.03272727
ILMN_1376898 184.7241 0.01575758
ILMN_1368325 333.3639 0.001212121
ILMN_1353563 1256.273 0
ILMN_1348794 125.6931 0.9248485
ILMN_1364273 470.3622 0
ILMN_1369433 501.0695 0
ILMN_1349007 462.1621 0
ILMN_1374156 174.7248 0.0339394
ILMN_1360232 1196.431 0
ILMN_1355155 3922.024 0
ILMN_1362563 186.2123 0.01333333
ILMN_1355815 178.1824 0.0230303

Total number of rows: 22523

Table truncated, full table size 652 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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