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Sample GSM1016347 Query DataSets for GSM1016347
Status Public on Aug 19, 2013
Title H0980_HPC (dataset 1)
Sample type RNA
 
Source name hippocampus, stem cells, adherent
Organism Homo sapiens
Characteristics gender: female
age: 53
tissue: hippocampus
cell type: stem cells
growth type: adherent
passage: 1
Growth protocol Adherent cells.
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays.
 
Hybridization protocol Standard Illumina hybridization protocol.
Scan protocol Standard Illumina scanning protocol.
Description SAMPLE 5
Data processing The data were normalized using quantile normalization with IlluminaGUI in R.
 
Submission date Oct 05, 2012
Last update date Aug 19, 2013
Contact name Wayne George Murrell
E-mail(s) [email protected]
Phone +4723071405
Fax +4723071397
Organization name Oslo University Hospital
Department Institute for Surgical Research
Lab Vilhelm Magnus Laboratory
Street address Sognsvannsveien 20
City Oslo
ZIP/Postal code 0027
Country Norway
 
Platform ID GPL6884
Series (2)
GSE41390 Adult human brain stem cells 1
GSE41470 Expansion of multipotent stem cells from the adult human brain

Data table header descriptions
ID_REF
VALUE Quantile-normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1762337 34.51975 0.8682477
ILMN_2055271 48.68512 0.07509881
ILMN_1736007 42.92744 0.198946
ILMN_2383229 34.79039 0.8392622
ILMN_1806310 38.61483 0.4598155
ILMN_1779670 36.51305 0.6693017
ILMN_1653355 48.58047 0.07773386
ILMN_1717783 35.06916 0.8063241
ILMN_1705025 38.87114 0.4400527
ILMN_1814316 33.29337 0.9393939
ILMN_2359168 42.45797 0.2147563
ILMN_1731507 38.22305 0.4795784
ILMN_1787689 44.13816 0.168643
ILMN_1745607 51.41911 0.05006588
ILMN_2136495 34.62789 0.8577075
ILMN_1668111 32.79645 0.9604743
ILMN_2295559 39.97132 0.3517787
ILMN_1735045 166.5519 0
ILMN_1680754 36.02711 0.7101449
ILMN_2375184 42.13821 0.229249

Total number of rows: 48803

Table truncated, full table size 1470 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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