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Series GSE99342 Query DataSets for GSE99342
Status Public on Jul 13, 2017
Title microRNA data involved in Japanese flounder (Paralichthys olivaceus) albinism
Organism Paralichthys olivaceus
Experiment type Expression profiling by high throughput sequencing
Summary In this study, a high-throughput sequencing strategy was employed to identify the miRNAs involved in P. olivaceus albinism. High-throughput miRNA sequencing identified a total of 475 miRNAs, including 64 novel miRNAs. Furthermore, 33 differentially expressed miRNAs containing 13 up-regulated and 20 down-regulated miRNAs were identified in albino versus normally pigmented individuals (fold change ≥1.5 or ≤0.67 and p≤0.05).
 
Overall design Examination of the ocular side skin of wild type and albinism Paralichtys olivaceus
 
Contributor(s) Wang N, Chen S
Citation(s) 28777813
Submission date May 26, 2017
Last update date May 15, 2019
Contact name Na Wang
E-mail(s) [email protected]
Phone +8653285831605
Organization name Yellow Sea Fisheries Research Institute, Chinese Academy Fishery Science
Street address 106 Nanjing Road
City Qingdao
State/province Shandong
ZIP/Postal code 266071
Country China
 
Platforms (1)
GPL23520 Illumina HiSeq 2500 (Paralichthys olivaceus)
Samples (6)
GSM2642484 PO_alb miRNA-seq 1
GSM2642485 PO_alb miRNA-seq 2
GSM2642486 PO_alb miRNA-seq 3
This SubSeries is part of SuperSeries:
GSE99343 Transcriptome and microRNA data involved in Japanese flounder (Paralichthys olivaceus) albinism
Relations
BioProject PRJNA388163
SRA SRP108111

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE99342_All_expressed_miRNAs_information.xls.gz 266.7 Kb (ftp)(http) XLS
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Raw data are available in SRA
Processed data are available on Series record

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