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Series GSE99119 Query DataSets for GSE99119
Status Public on May 21, 2019
Title RNA binding protein DDX1 is responsible for fatty acid mediated repression of insulin translation
Organism Rattus norvegicus
Experiment type Other
Summary Previous studies have focused on the combined glucolipoxicity that is presence of high glucose and free fatty acid levels effect on insulin gene expression, but the effect of high FFA and normal glucose level on insulin expression is unkown. Here we observed that palmitate can inhibit insulin translation. And we identified a novel insulin mrna binding protein DDX1 that is responsible for fatty acid mediated insulin translation inhibition. Palmitate treatment causes phosphorylation of DDX1 at S295 and dissociation from insulin mRNA, which decreases insulin translation.
 
Overall design we used CLIP-seq to identify target genes and the binding sequences of DDX1 in INS1 cell
 
Contributor(s) Li Z, Cai Z, Zhong W, Xu T
Citation(s) 30295850
Submission date May 21, 2017
Last update date Jul 25, 2021
Contact name Wen Zhong
E-mail(s) [email protected]
Organization name Institute of Biophysics, Chinese Academy of Sciences
Street address Datun Road
City Beijing
ZIP/Postal code 100101
Country China
 
Platforms (1)
GPL18694 Illumina HiSeq 2500 (Rattus norvegicus)
Samples (2)
GSM2633755 DDX1_CLIP_1
GSM2633756 DDX1_CLIP_2
Relations
BioProject PRJNA387363
SRA SRP107684

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE99119_RAW.tar 177.7 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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