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| Status |
Public on Dec 31, 2009 |
| Title |
atmyc2_cop1_mutant_light_ABA_treatment |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by array
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| Summary |
Although many regulatory components of light signaling have been functionally characterized, only a few of them have been reported to cross talk with other signaling cascades. In this study, we have analyzed the expression profiles of Arabidopsis genes in wild-type, atmyc2 mutant, cop1-6 mutant, and atmyc2 cop1-6 double mutant seedlings grown under constant dark, constant blue-light, and constant blue-light along with abscisic acid (ABA) to illustrate the interplay of negative regulators, AtMYC2 and COP1, in light and ABA signaling
Keywords: Light and abscisic acid treatment
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| Overall design |
Expression data for wild-type, atmyc2, cop1-6, and atmyc2 cop1-6 seedlings under constant dark, blue-light and blue-light along with abscisic acid
Ten-day-old Arabidopsis (wild-type, atmyc2 mutant, cop1-6 mutant, and atmyc2 cop1-6 double mutant) seedlings grown under constant dark, constant blue-light (35 µmol/sec/m2), and constant blue-light along with ABA (0.5 µm) were used for RNA extraction and hybridization on Affymetrix microarrays. Two biological replicates of each sample were used for microarray analysis.
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| Contributor(s) |
Jain M, Gangappa SN, Khurana JP, Chattopadhyay S |
| Citation(s) |
31788657 |
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| Submission date |
Sep 05, 2007 |
| Last update date |
Dec 09, 2019 |
| Contact name |
Sudip Chattopadhyay |
| E-mail(s) |
[email protected]
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| Phone |
91-11-26178612
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| Organization name |
National Institute For Plant Genome Research
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| Street address |
Aruna Asaf Ali Marg
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| City |
New Delhi |
| ZIP/Postal code |
110 067 |
| Country |
India |
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| Platforms (1) |
| GPL198 |
[ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array |
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| Samples (24)
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| Relations |
| BioProject |
PRJNA102391 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE8955_RAW.tar |
49.9 Mb |
(http)(custom) |
TAR (of CEL) |
| Processed data included within Sample table |
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