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Series GSE84874 Query DataSets for GSE84874
Status Public on Oct 01, 2016
Title Time course of myeloid differentiation in the Lysozyme-GFP ER-HoxA9 cells following estradiol withdrawal
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Lysozyme-GFP ER-HoxA9 cells were cultured in the presence of estradiol (active ER-HoxA9) or in the absence of estradiol (inactive ER-HoxA9). Samples were taken at 10 time points over a 120 hour time course of myeloid differentiation to examine those gene expression changes that accompany differentiation upon the release of HoxA9 differentiation arrest.
 
Overall design RNA Sequencing at 10 different time points done in duplicate
 
Contributor(s) Sykes DB, Scadden DT
Citation(s) 27641501
Submission date Jul 26, 2016
Last update date May 15, 2019
Contact name David B Sykes
E-mail(s) [email protected]
Organization name Massachusetts General Hospital
Department Center for Regenerative Medicine
Street address 185 Cambridge St
City Boston
State/province Massachusetts
ZIP/Postal code 02114
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (24)
GSM2252944 0 hour - Replicate 1
GSM2252945 0 hour - Replicate 2
GSM2252946 4 hour - Replicate 1
Relations
BioProject PRJNA335412
SRA SRP079923

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE84874_counts.txt.gz 915.2 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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