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Series GSE83639 Query DataSets for GSE83639
Status Public on Aug 03, 2019
Title Gene expression affected by loss-of- or gain-of-function of Dmrt3/Dmrta2 in the dorsomedial telencephalon
Organism Mus musculus
Experiment type Expression profiling by array
Summary We then examined the mutant mice that lack both Dmrt3 and Dmrta2 alleles, and found the size of the medial cortex including the hippocampus and the cortical hem was significantly reduced in mutant brains .To further investigate how Dmrt3 and Dmrta2 are involved in the development of the medial cortex, we applied gene expression profiling approach using whole genome DNA microarray to identify genes which are differentially expressed in Dmrt3/Dmrta2-knockdown cells. Cortical cells knocked-down both Dmrt3 and Dmrta2 exhibited a dramatic increase of Pax6 expression in the medial cortex, leading to the precocious neuronal differentiation, and simultaneous knockdown of Pax6 with Dmrt3/Dmrta2 rescued the phenotype. Our results unveil a key mechanism that mammalian Dmrt factors maintain more proliferative potential of neural progenitors by suppressing Pax6 expression in the developing cerebral cortex.
 
Overall design We compared gene expression in cells transfected with control siRNAs, two different sets of Dmrt3/Dmrta2 siRNAs (set1 and set2), and a expression vector for Dmrta2, using 3 independent replicates in each group.
 
Contributor(s) Konno D
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Submission date Jun 23, 2016
Last update date Aug 04, 2019
Contact name Daijiro Konno
E-mail(s) [email protected]
Organization name RIKEN
Department Center for Developmental Biology (CDB)
Lab Laboratory for Cell Asymmetry
Street address 2-2-3 Minatojima Minamimachi Chuo-ku
City Kobe
ZIP/Postal code 6500047
Country Japan
 
Platforms (1)
GPL11202 Agilent-026655 Whole Mouse Genome Microarray 4x44K v2 (Probe Name version)
Samples (12)
GSM2211647 Control siRNAs_rep1
GSM2211648 siRNAs for Dmrt3/Dmrta2 set1_rep1
GSM2211649 siRNAs for Dmrt3/Dmrta2 set2_rep1
Relations
BioProject PRJNA326591

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE83639_RAW.tar 25.6 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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