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Series GSE83290 Query DataSets for GSE83290
Status Public on Jun 15, 2016
Title A hyperactive transcriptional state marks genome reactivation at the mitosis-G1 transition [CaptureC]
Organism Mus musculus
Experiment type Other
Summary Capture-C of G1E ER4 cell line in a nocodazole arrest-release experiment anchored at multiple gene promoters to quantify long-range chromatin interactions at the mitosis-G1 transition.
 
Overall design Nocodazole arrest-release in G1E ER4 cell line under conditions of 13h estradiol treatment (unless otherwise specified as 'unin', i.e. no estradiol treatment).
 
Contributor(s) Hsiung C, Blobel G
Citation(s) 27340175
Submission date Jun 13, 2016
Last update date May 15, 2019
Contact name Ross Hardison
E-mail(s) [email protected]
Organization name Pennsylvania State University
Street address 303 Wartik Lab
City University Park
State/province PA
ZIP/Postal code 16802
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (26)
GSM2198225 Kit_unin_CaptureC_merge
GSM2198226 Kit_async_CaptureC_merge
GSM2198227 Kit_1h_CaptureC_merge
This SubSeries is part of SuperSeries:
GSE83293 A hyperactive transcriptional state marks genome reactivation at the mitosis-G1 transition
Relations
BioProject PRJNA325492
SRA SRP076479

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE83290_RAW.tar 5.5 Mb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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