|
| Status |
Public on Sep 01, 2008 |
| Title |
affy_aba_ath1-Characterization of aba3-1 suppressor mutants |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by array
|
| Summary |
affy_aba_ath1 - affy_aba_ath1 - In order to identify new genes implicated in ABA signalisation pathways, we have carried out a screen for suppressor mutants of the ABA deficient mutant aba3-1. Infrared thermography was used to identify plants whose cold leaf phenotype was reverted. The transcriptome analysis of four recessive suppressor mutants was undertaken to determine which genes are differentially expressed compared to the wild type or aba3-1. Such genes could represent the mutated gene itself or indicate signalling or response pathways affected by the mutation-comparison of four suppressor mutants (g-radiation induced) to wild type and the ABA deficient mutant aba3-1
Keywords: wt vs mutant comparison
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| |
|
| Overall design |
12 arrays - ATH1
|
| |
|
| Contributor(s) |
Balzergue S, North H, Plessis A, Martin-Magniette ML |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
May 31, 2007 |
| Last update date |
Aug 28, 2018 |
| Contact name |
sandrine balzergue |
| Organization name |
INRA
|
| Lab |
IRHS
|
| Street address |
Rue G. Morel
|
| City |
Beaucouze |
| ZIP/Postal code |
49000 |
| Country |
France |
| |
|
| Platforms (1) |
| GPL198 |
[ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array |
|
| Samples (12)
|
| GSM197135 |
wt_1 with array type ATH1 from Affymetrix |
| GSM197136 |
aba3-1_1 with array type ATH1 from Affymetrix |
| GSM197137 |
S14-150_1 with array type ATH1 from Affymetrix |
| GSM197138 |
S15-118_1 with array type ATH1 from Affymetrix |
| GSM197139 |
S58-2_1 with array type ATH1 from Affymetrix |
| GSM197140 |
S82-2_1 with array type ATH1 from Affymetrix |
| GSM197141 |
wt_2 with array type ATH1 from Affymetrix |
| GSM197142 |
aba3-1_2 with array type ATH1 from Affymetrix |
| GSM197143 |
S14-150_2 with array type ATH1 from Affymetrix |
| GSM197144 |
S15-118_2 with array type ATH1 from Affymetrix |
| GSM197145 |
S58-2_2 with array type ATH1 from Affymetrix |
| GSM197146 |
S82-2_2 with array type ATH1 from Affymetrix |
|
| Relations |
| BioProject |
PRJNA100711 |
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