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| Status |
Public on Mar 15, 2016 |
| Title |
Mouse popliteal lymph node transcriptome response to a wild type West Nile virus (WNV), New York 99 Strain, and mutant WNV-E218A viruses [mRNA] |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by array
|
| Summary |
The purpose is to obtain samples for mRNA, miRNA, proteomics, lipidomics, metabolomics, and histopathology analysis in mouse cortex infected with wild-type West Nile virus (WNV; WNV-NY99 382), and mutant WNV-E218A (WNV-NY99 382 E218A 2 nt).
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| Overall design |
Mice are inoculated with WNV in both hind footpads at a dose of 100 FFU. Infected samples were collected in quintuplet; time-matched mocks were collected in triplets in parallel with infected samples. Time points: 1, 2, 4, and 6 days post-infection.
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| Contributor(s) |
Thackray L, Diamond M, Waters KM, Thompson A, Eisfeld AJ, Kawaoka Y |
| Citation(s) |
34051754, 38565538 |
| |
| Submission date |
Mar 04, 2016 |
| Last update date |
Jun 19, 2024 |
| Contact name |
Natalie Heller |
| E-mail(s) |
[email protected]
|
| Organization name |
PNNL
|
| Street address |
902 Battelle Blvd.
|
| City |
Richland |
| ZIP/Postal code |
99354 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL11202 |
Agilent-026655 Whole Mouse Genome Microarray 4x44K v2 (Probe Name version) |
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| Samples (51)
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| This SubSeries is part of SuperSeries: |
| GSE65575 |
Modeling Host Responses to Understand Severe Human Virus Infections |
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| Relations |
| BioProject |
PRJNA314302 |
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