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GEO accession:
Series GSE71218
Query DataSets for GSE71218
Status
Public on Feb 19, 2016
Title
How C/EBPa creates an elite cell state for reprogramming to pluripotency
Organism
Mus musculus
Experiment type
Expression profiling by array
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
26974661
Submission date
Jul 22, 2015
Last update date
May 15, 2019
Contact name
samuel Collombet
E-mail(s)
[email protected]
Organization name
Ecole Normale Superieure
Department
Biology
Lab
Thieffry
Street address
46 rue d'Ulm
City
Paris
ZIP/Postal code
75005
Country
France
Platforms (3)
GPL10787
Agilent-028005 SurePrint G3 Mouse GE 8x60K Microarray (Probe Name version)
GPL13112
Illumina HiSeq 2000 (Mus musculus)
GPL19057
Illumina NextSeq 500 (Mus musculus)
Samples (68)
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GSM1830090
Bcell_array_bio1
GSM1830091
Bcell_array_bio2
GSM1830092
pulse_array_bio1
GSM1830093
pulse_array_bio2
GSM1830094
d1_Oct4Positive_array_bio1
GSM1830095
d1_Oct4Positive_array_bio2
GSM1830096
d2_Oct4Positive_array_bio1
GSM1830097
d2_Oct4Positive_array_bio2
GSM1830098
d3_Oct4Positive_array_bio1
GSM1830099
d3_Oct4Positive_array_bio2
GSM1830100
iPS_array_bio1
GSM1830101
iPS_array_bio2
GSM1830102
ES_array_bio1
GSM1830103
ES_array_bio2
GSM1830104
GMP_array_bio1
GSM1830105
GMP_array_bio2
GSM1830106
GMPfast_array_bio1
GSM1830107
GMPfast_array_bio2
GSM1830108
GMPslow_array_bio1
GSM1830109
GMPslow_array_bio2
GSM1830110
Bcell_ATAC
GSM1830111
Bcell_Cebpa18h_ATAC
GSM1830112
Bcell_OKSMd1_ATAC
GSM1830113
Bcell_OKSMd2_ATAC
GSM1830114
ES_ATAC
GSM1830115
GMP_ATAC
GSM1830116
Bcell_ChIPseq_input
GSM1830117
Bcell_Cebpa18h_ChIPseq_input
GSM1830118
Bcell_Cebpa18h_OSKM1d_ChIPseq_input
GSM1830119
Bcell_Cebpa18h_OSKM2d_ChIPseq_input
GSM1830120
Bcell_ChIPseq_H3K4me3
GSM1830121
Bcell_Cebpa18h_ChIPseq_H3K4me3
GSM1830122
Bcell_Cebpa18h_OSKM1d_ChIPseq_H3K4me3
GSM1830123
Bcell_Cebpa18h_OSKM2d_ChIPseq_H3K4me3
GSM1830124
Bcell_ChIPseq_Klf4
GSM1830125
Bcell_Cebpa18h_ChIPseq_Klf4
GSM1830126
Bcell_Cebpa18h_OSKM1d_ChIPseq_Klf4
GSM1830127
Bcell_Cebpa18h_OSKM2d_ChIPseq_Klf4
GSM1830128
Bcell_Cebpa18h_ChIPseq_Cebpa
GSM1830129
Bcell_ChIPseq_Cebpa
GSM1830130
Bcell_ChIPseq_K27ac
GSM1830131
Bcell_Cebpa18h_ChIPseq_K27ac
GSM1830132
Bcell_Cebpa18h_OSKM1d_ChIPseq_K27ac
GSM1830133
Bcell_Cebpa18h_OSKM2d_ChIPseq_K27ac
GSM1830138
Bcell_Cebpa18h_OKSMd1_RNAseq_bio1
GSM1830139
Bcell_Cebpa18h_OKSMd1_RNAseq_bio2
GSM1830140
Bcell_Cebpa18h_OKSMd2_RNAseq_bio1
GSM1830141
Bcell_Cebpa18h_OKSMd2_RNAseq_bio2
GSM1830142
Bcell_Cebpa18h_RNAseq_bio1
GSM1830143
Bcell_Cebpa18h_RNAseq_bio2
GSM1830144
Bcell_RNAseq_bio1
GSM1830145
Bcell_RNAseq_bio2
GSM1830146
ES_RNAseq_bio1
GSM1830147
ES_RNAseq_bio2
GSM1830148
GMP_fast_RNAseq_bio1
GSM1830149
GMP_RNAseq_bio1
GSM1830150
GMP_slow_RNAseq_bio1
GSM1956905
Bcell_4C_Klf4promoter
GSM1956906
Bcell+Cebpa18h_4C_Klf4promoter
GSM1956907
ESC_4C_Klf4promoter
GSM1956908
Bcell_4C_Klf4enhancer
GSM1956909
Bcell+Cebpa18h_4C_Klf4enhancer
GSM1956910
ESC_4C_Klf4enhancer
GSM1956911
GMP_4C_Klf4promoter
GSM1963706
Bcell_UT_ChIPseq_Brd4
GSM1963707
Bcell_Cebpa18h_ChIPseq_Brd4
GSM1963708
Bcell_UT_ChIPseq_Pu1
GSM1963709
Bcell_Cebpa18h_ChIPseq_Pu1
This SuperSeries is composed of the following SubSeries:
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GSE71213
How C/EBPa creates an elite cell state for reprogramming to pluripotency [array]
GSE71214
How C/EBPa creates an elite cell state for reprogramming to pluripotency [ATACseq]
GSE71215
How C/EBPa creates an elite cell state for reprogramming to pluripotency [ChIPseq]
GSE71217
How C/EBPa creates an elite cell state for reprogramming to pluripotency [RNAseq]
GSE75481
How C/EBPa creates an elite cell state for reprogramming to pluripotency [4C]
Relations
BioProject
PRJNA290617
Download family
Format
SOFT formatted family file(s)
SOFT
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Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE71218_RAW.tar
17.8 Gb
(http)
(custom)
TAR (of BW, TXT)
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