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Series GSE70791 Query DataSets for GSE70791
Status Public on Jul 11, 2015
Title PAK1 is a Therapeutic Target in Acute Myeloid Leukemia and Myelodysplastic Syndrome
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Poor clinical outcome of Acute Myeloid Leukemia (AML) and Myelodysplastic Syndrome (MDS) has been attributed to failure of current chemotherapeutic regimens to target leukemic stem cells. We recently identified p21-activated kinase (PAK1) as a downstream effector molecule of H2.0-like homeobox (HLX), a gene functionally relevant for AML pathogenesis. In this study, we find that inhibition of PAK1 activity by small molecule inhibitors or by RNA interference leads to profound leukemia-inhibitory effects both in vitro and in vivo. Inhibition of PAK1 induces differentiation and apoptosis of AML cells through downregulation of MYC oncogene and a core network of MYC target genes. Moreover, we find that PAK1 up-regulation occurs during disease progression and is relevant for patient survival in MDS. Importantly, we find that inhibition of PAK1 inhibits primary human leukemic cells including immature leukemic stem cell-enriched populations. Our studies highlight PAK1 as a novel target in AML and MDS, and support the use of PAK1 inhibitors as a therapeutic strategy in these diseases.
To obtain insight into the molecular mechanism for the induction of apoptosis and differentiation resulting from PAK1 inhibition in AML, we performed gene expression microarrays following treatment with either IPA-3 or FRAX-597.
 
Overall design RNA was isolated from THP-1 cells after 5 hours of treatment with IPA-3 (6 ug/mL), FRAX-597 (2 ug/mL) or an equal volume of DMSO using Trizol Reagent (Invitrogen).
 
Contributor(s) Pandolfi A, Stanley R, Steidl U
Citation(s) 26170031
Submission date Jul 10, 2015
Last update date Mar 15, 2019
Contact name Ashley M Pandolfi
E-mail(s) [email protected]
Phone 7184303437
Organization name Albert Einstein College of Medicine
Department Cell Biology
Lab Ulrich Steidl
Street address 1300 Morris Park Chanin 606
City Bronx
State/province NY
ZIP/Postal code 10461
Country USA
 
Platforms (1)
GPL16686 [HuGene-2_0-st] Affymetrix Human Gene 2.0 ST Array [transcript (gene) version]
Samples (8)
GSM1818751 THP1 5 hours DMSO treatment
GSM1818752 THP1 5 hours DMSO treatment replicate 2
GSM1818753 THP1 5 hours IPA3 6ug per mL treatment
Relations
BioProject PRJNA289538

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE70791_RAW.tar 70.1 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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