|
| Status |
Public on Jan 22, 2007 |
| Title |
Transcriptome response to change in ploidy level in Arabidopsis |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by array
|
| Summary |
By reciprocally crossing 2x and 4x C24 ecotype plants, we have generated 4 types of offspring with various ploidy (2x; 3x; 4x) or parent-of-origin genome dosage (3x from 4xper2x; 3x from 2xper4x). For each offspring generated, total RNA was extracted using Trizol from 8 seedlings 9 days after germination (developmental stage1.02, 2 leaves).
Sample names:
DIP diploid
TET tetraploid
TFE triploid female excess
TME triplod male excess
Experimenter name: Olivier Garnier
Experimenter phone: 00-353-21-490-4028
Experimenter address: Plant molecular genetics lab, Dpt of Biochemistry, UCC
Experimenter address: Lee Maltings Prospect row
Experimenter zip/postal_code: Cork
Experimenter country: Ireland
Keywords: strain_or_line_design
|
| |
|
| Overall design |
11 samples were used in this experiment
|
| |
|
| Contributor(s) |
Garnier O, Spillane C, Townsend H, Emmerson Z, Schildknecht B |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Jan 22, 2007 |
| Last update date |
Aug 28, 2018 |
| Contact name |
Nottingham Arabidopsis Stock Centre (NASC) |
| E-mail(s) |
[email protected]
|
| Phone |
+44 (0)115 951 3237
|
| Fax |
+44 (0)115 951 3297
|
| URL |
http://arabidopsis.info/
|
| Organization name |
Nottingham Arabidopsis Stock Centre (NASC)
|
| Department |
School of Biosciences, University of Nottingham
|
| Street address |
Sutton Bonington Campus
|
| City |
Loughborough |
| ZIP/Postal code |
LE12 5RD |
| Country |
United Kingdom |
| |
|
| Platforms (1) |
| GPL198 |
[ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array |
|
| Samples (11)
|
|
| Relations |
| BioProject |
PRJNA99151 |
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