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Series GSE64145 Query DataSets for GSE64145
Status Public on Oct 01, 2015
Title Breaking the first lineage barrier: Direct induction of trophoblast stem cells from murine fibroblasts
Organism Mus musculus
Experiment type Expression profiling by array
Summary Trophoblast stem cells represent the stem cell population of the extra-embryonic lineage and arise as a result of the first cell fate decision. From blastocyst stage onwards, a distinct epigenetic lineage barrier strictly separates mouse embryonic and extra-embryonic lineages. Recently, it has been shown that this epigenetic barrier cannot be fully overcome as the expression of TS-determining factors in embryonic stem cells lead to incomplete transdifferentiation. Here, we demonstrate that transient expression of Tfap2c, Gata3, Eomes and Ets2 in fibroblasts suffices to generate cells which are almost identical to trophoblast stem cells based on morphology, expression and methylation pattern. Further, these induced trophoblast stem cells display transgene independent self-renewal, differentiate along the extra-embryonic lineage and chimerize the placenta upon blastocyst injection. Our findings provide insights into the transcription factor networks governing trophoblast stem cell identity and offer a new tool for studying the hierarchy of those factors.
 
Overall design 11 samples were analyzed:
MEF4F, mouse embyronic fibroblasts (MEFs) transduced with Tfap2c, Gata3, Eomes and Ets2, 3 replicates.
TS, mouse TS-EGFP trophoblast stem cells, 2 replicates.
iTSC4F5, mouse induced trophoblast stem (TS) cells clone A from 4 factor transduced MEFs, 3 replicates.
iTSC4F8, mouse induced trophoblast stem (TS) cells clone D from 4 factor transduced MEFs, 3 replicates.
 
Contributor(s) Kubaczka C, Senner CE, Cierlitza M, Araúzo-Bravo MJ, Kuckenberg P, Peitz M, Hemberger M, Schorle H
Citation(s) 26412560
Submission date Dec 12, 2014
Last update date Jan 15, 2022
Contact name Marcos J. Araúzo-Bravo
E-mail(s) [email protected]
Phone +34 943 00 6108
Organization name Max Planck Institute for Molecular Biomedicine
Department Cell and Developmental Biology
Lab Computational Biology and Bionformatics
Street address Rogentstrasse
City Muenster
ZIP/Postal code 48149
Country Germany
 
Platforms (1)
GPL6887 Illumina MouseWG-6 v2.0 expression beadchip
Samples (11)
GSM1565269 TS, rep 1
GSM1565270 TS, rep 2
GSM1565271 MEF4F, rep 3
Relations
BioProject PRJNA270252

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE64145_RAW.tar 15.8 Mb (http)(custom) TAR
GSE64145_non-normalized.txt.gz 1.9 Mb (ftp)(http) TXT
Processed data included within Sample table

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