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Series GSE64004 Query DataSets for GSE64004
Status Public on Aug 03, 2016
Title Expression data from ileum of mice suffered from subchronic and mild social defeat stress
Organism Mus musculus
Experiment type Expression profiling by array
Summary This study aimed to investigate the effects of depression on transcriptome in ileum using a subchronic and mild social defeat stress (sCSDS) model. In addition to exhibiting social deficit and hyperphagia-like behavior, the sCSDS mice keep much more water in their body than control mice. In order to investigate the effect of social defeat stress on not only central nervous system but also function of gastrointestinal tract, the gene expression in ileum of stressed mice was compared with control mice.
We used microarrays to detail the gene expression after 10 days of social defeat stress and identified distinct classes of down-regulated genes during this process.
 
Overall design The duration of physical contacts was set at 5 min after the first attack bite at Day 1, and then was reduced 0.5 min per day from Day 2 to Day 10.
 
Contributor(s) Aoki-Yoshida A, Aoki R, Goto T, Toyoda A, Suzuki C
Citation(s) 27482843
Submission date Dec 09, 2014
Last update date Feb 11, 2019
Contact name Chise Suzuki
Organization name NARO Institute of Livestock and Grassland Science
Department Animal Products Res. Division
Lab Functional Biomolecules Res. Group
Street address 2 Ikenodai
City Tsukuba
State/province Ibaraki
ZIP/Postal code 305-0901
Country Japan
 
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (10)
GSM1562285 ileum control rep1
GSM1562286 ileum control rep2
GSM1562287 ileum control rep3
Relations
BioProject PRJNA269740

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE64004_RAW.tar 33.3 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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