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Series GSE5740 Query DataSets for GSE5740
Status Public on Jan 08, 2007
Title Polycomb Binding Protein
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary We have identified a gene encoding apolycomb-chromo domain binding protein. Complete knockout of these plants do not lead to a phenotype, but a reduction of gene expression in RNAi line produces a defined phenotype. This argues in favour of a compensation mechanism that is switched on once the concentration of the gene reaches a control level.The aim of the experiment is to search for such compensatory factors that are up-regulated in the knockout line.

Experimenter name = Katharine Cain
Experimenter phone = 01133433146
Experimenter department = University of Leeds
Experimenter address = University of Leeds
Experimenter address = Clarendon Way
Experimenter address = Leeds
Experimenter zip/postal_code = LS29JT
Experimenter country = UK
Keywords: genetic_modification_design
 
Overall design 4 samples were used in this experiment
 
Contributor(s) Cain K, Meyer P, Townsend H, Emmerson Z, Schildknecht B
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Sep 01, 2006
Last update date Aug 28, 2018
Contact name Nottingham Arabidopsis Stock Centre (NASC)
E-mail(s) [email protected]
Phone +44 (0)115 951 3237
Fax +44 (0)115 951 3297
URL http://arabidopsis.info/
Organization name Nottingham Arabidopsis Stock Centre (NASC)
Department School of Biosciences, University of Nottingham
Street address Sutton Bonington Campus
City Loughborough
ZIP/Postal code LE12 5RD
Country United Kingdom
 
Platforms (1)
GPL198 [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array
Samples (4)
GSM133866 Cain_1-1_WT1_Rep1_ATH1
GSM133867 Cain_1-3_CDB1-Knockout_Rep1_ATH1
GSM133868 Cain_1-2_WT1_Rep2_ATH1
Relations
BioProject PRJNA97053

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE5740_RAW.tar 9.2 Mb (http)(custom) TAR (of CEL)

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