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Series GSE55307 Query DataSets for GSE55307
Status Public on Feb 25, 2014
Title Gene profiling in CBA and BL/6 bone marrow derived dendritic cells (BMDC)
Organism Mus musculus
Experiment type Expression profiling by array
Summary Analysis of baseline gene expression in bone marrow derived dendritic cells (BMDC) from female CBA/J (CBA) and C57BL/6 (BL/6) mice. Results provide insight into strain-dependent differences in gene expression.
 
Overall design CBA and BL/6 BMDCs prepared from individual mice were plated in replicate at 1x10^6 cells/ml in 48-well tissue culture plates (BD Falcon). Replicates were pooled after 4hr and total RNA was obtained by Trizol® (Invitrogen) extraction according to the manufacturer’s instructions.
 
Contributor(s) Stadecker MJ, Ponichtera HE, Shainheit MG, Lai C, Parnell LD
Citation(s) 24729611
Submission date Feb 24, 2014
Last update date Mar 04, 2019
Contact name Miguel Stadecker
Organization name Tufts University School of Medicine
Street address 150 Harrison Ave
City Boston
State/province MA
ZIP/Postal code 02111
Country USA
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (2)
GSM1333893 Affymetrix Mouse Gene 1.0 ST Array for CBA DCs
GSM1333894 Affymetrix Mouse Gene 1.0 ST Array for BL6 DCs
Relations
BioProject PRJNA239267

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE55307_Processed_Data_for_CBA_vs._BL6_DCs_with_gene_annotation.txt.gz 2.6 Mb (ftp)(http) TXT
GSE55307_RAW.tar 7.8 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table
Processed data are available on Series record

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