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Series GSE5530 Query DataSets for GSE5530
Status Public on Aug 15, 2006
Title Hydrogen peroxide stress and Zat12 over-expression in Arabidopsis.
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary In this experiment we tested the transcriptome of transgenic Arabidopsis seedlings (5-day-old) constitutively expressing the zinc-finger protein Zat12 (At5g59820) under the control of the 35S-CaMV promoter (Zat12). The transcriptome of these seedlings was compared to that of wild type seedlings grown under the same conditions (WT) and to that of wild type seedlings grown under the same conditions and subjected to a hydrogen peroxide stress (WT+H2O2). Hydrogen peroxide treatment was performed by applying 20 mM hydrogen peroxide for 1 hour. In parallel to these experiments transgenic plants expressing Zat12 were subjected to a similar hydrogen peroxide stress (Zat12+H2O2). All treatments were performed with similar size and age seedlings grown in liquid culture (MS) and sampled at the same time as described by Davletova et al., 2005.

Experimenter name = Ron Mittler
Experimenter phone = 1-775-784-1384
Experimenter fax = 1-775-784-1650
Experimenter department = Dept. of Biochemistry
Experimenter institute = University of Nevada
Experimenter address = MS200
Experimenter address = Reno
Experimenter address = Nevada
Experimenter zip/postal_code = 89557
Experimenter country = USA
Keywords: genetic_modification_design; stimulus_or_stress_design
 
Overall design 12 samples were used in this experiment
 
Contributor(s) Mittler R, Mittler R, Townsend H, Emmerson Z, Schildknecht B
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Submission date Aug 15, 2006
Last update date Aug 28, 2018
Contact name Nottingham Arabidopsis Stock Centre (NASC)
E-mail(s) [email protected]
Phone +44 (0)115 951 3237
Fax +44 (0)115 951 3297
URL http://arabidopsis.info/
Organization name Nottingham Arabidopsis Stock Centre (NASC)
Department School of Biosciences, University of Nottingham
Street address Sutton Bonington Campus
City Loughborough
ZIP/Postal code LE12 5RD
Country United Kingdom
 
Platforms (1)
GPL198 [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array
Samples (12)
GSM128757 Mittler_2-1_wildtype_Rep1_ATH1
GSM128758 Mittler_2-2_wildtype_Rep2_ATH1
GSM128759 Mittler_2-3_wildtype_Rep3_ATH1
Relations
Affiliated with GSE69995
BioProject PRJNA96011

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE5530_RAW.tar 41.1 Mb (http)(custom) TAR (of CEL)

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