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Series GSE49216 Query DataSets for GSE49216
Status Public on Sep 23, 2013
Title Gene regulation by Pax6 in the lens placode - E10.25
Organism Mus musculus
Experiment type Expression profiling by array
Summary Wild type or Pax6 fx/fx; Le-Cre-positive surface ectoderm from E10.25 mouse embryos was laser micodissected from three embryos of each genotype. Total RNA was purified and reverse transcribed and amplified using a NuGEN kit. cDNA was biotinylated and hybridized to Illumina Mouse6 bead arrays.
 
Overall design Three wild type and three knockout embryos were used. Each array used the cDNA obtained from the two prospective lens tissues from one embryo.
 
Contributor(s) Beebe DC, Huang J
Citation(s) 21540023, 24038357
Submission date Jul 25, 2013
Last update date Sep 23, 2013
Contact name David Cy Beebe
E-mail(s) [email protected]
Organization name Washington University School of Medicine
Department Ophthalmology and Visual Science
Lab Campus Box 8096
Street address 660 S. Euclid Ave.
City Saint Louis
State/province MO
ZIP/Postal code 63110
Country USA
 
Platforms (1)
GPL6105 Illumina mouse-6 v1.1 expression beadchip
Samples (6)
GSM1195449 WT1, E10.25
GSM1195450 WT3, E10.25
GSM1195451 WT2, E10.25
This SubSeries is part of SuperSeries:
GSE49219 Histone posttranslational modifications and cell fate determination: Lens induction requires the lysine acetyltransferases CBP and p300
Relations
BioProject PRJNA213306

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE49216_RAW.tar 5.2 Mb (http)(custom) TAR
GSE49216_non-normalized.txt.gz 3.7 Mb (ftp)(http) TXT
Processed data included within Sample table

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