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Series GSE48398 Query DataSets for GSE48398
Status Public on Dec 01, 2013
Title Gene expression profiles of mammary epithelial and breast cancer cells following fever range hyperthermia
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Preclinical and clinical studies have shown for decades that tumor cells demonstrate significantly enhanced sensitivity to “fever range” hyperthermia (increasing the intratumoral temperature to 42-45oC) than normal cells, although it is unknown why cancer cells exhibit this distinctive susceptibility. To address this issue, mammary epithelial cells and three malignant breast cancer lines were subjected to hyperthermic shock and microarray analysis of the global transcription changes was subsequently performed.
 
Overall design MCF10A (mammary epithelial cells) and MCF7, MDA231, and MDA468 breast cancer cells were grow at normal growth temperatures or subjected to 30 minutes of hyperthermic (45oC) shock followed by replacement with conditioned media at normal growth temperatures. RNA was collected 4 hours after shock and subjected to microarray analysis.
 
Contributor(s) Bryan BA, Mitchell DC
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Submission date Jun 28, 2013
Last update date Aug 13, 2018
Contact name Brad Allen Bryan
E-mail(s) [email protected]
Organization name Texas Tech University Health Sciences Center
Department Biomedical Sciences
Street address 5001 El Paso Drive
City El Paso
State/province Texas
ZIP/Postal code 79905
Country USA
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (36)
GSM1177029 MCF10A 37oC rep1
GSM1177030 MCF10A 37oC rep2
GSM1177031 MCF10A 37oC rep3
Relations
BioProject PRJNA209945

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE48398_RAW.tar 26.2 Mb (http)(custom) TAR
GSE48398_non-normalized_data.txt.gz 10.0 Mb (ftp)(http) TXT
Processed data included within Sample table

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